BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034A12SP1|AL429848
(851 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1295 1349 0.0
3x_Contig62 761 0.0
>3x_Contig1295
Length = 7117
Score = 1349 bits (677), Expect = 0.0
Identities = 806/851 (94%), Gaps = 2/851 (0%)
Strand = Plus / Plus
Query: 2 tgtaagaagattcaccgttgtcttcaacagctctggtttcagagtcagtaactggttgga 61
|||||||||||| | ||||| || || || | |||||| || || ||||| ||||||||
Sbjct: 4731 tgtaagaagattaaaagttgtattaaaaagatatggtttaagtgtaagtaaatggttgga 4790
Query: 62 caattgggaaagaggcagcagcagacaaagtttgttcagcttctggagccttaccctttc 121
|||||||||||||| || || ||| |||||||||| || || ||||| || |||
Sbjct: 4791 aaattgggaaagaggaagaagaagaaaaagtttgttaagtttatggagaattcaaattta 4850
Query: 122 ttgggaagamgatgatcttagattggtattccttcaatctttggatgttcaagtccaaga 181
|||||||| | |||| |||||||||| || || ||| |||||||||||||||||||||
Sbjct: 4851 ttgggaagcagttgatattagattggttttaattaaatatttggatgttcaagtccaaga 4910
Query: 182 tttcttggtttctgttttgacgtctgtggtcgacagcaataccaatggttctggcgtaag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4911 tttcttggtttctgttttgacgtctgtggtcgacagcaataccaatggttctggcgtaag 4970
Query: 242 -aggagthaaaccagcagccttaatttcagccaaggtgaaacctctaccagctctaacct 300
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4971 caggagtcaaaccagcagccttaatttcagccaaggtgaaacctctaccagctctaacct 5030
Query: 301 ttctgttgtacttaacagttggagctctgacgamtggtctcaacaagtccaatggtcttg 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5031 ttctgttgtacttaacagttggagctctgacgactggtctcaacaagtccaatggtcttg 5090
Query: 361 gagcgatcttggcagccttagaagctctggcgtgamgtctggagaacttcttaccagctt 420
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 5091 gagcgatcttggcagccttagaagctctggcgtgacgtctggagaccttcttaccagctt 5150
Query: 421 ggtcgaagtgcaccttgamacgttcttgccagtgctttctgaagtggttcttcaaaattg 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5151 ggtcgaagtgcaccttgacacgttcttgccagtgctttctgaagtggttcttcaaaattg 5210
Query: 481 gtaagttcttggagatagctgtttaaaaattcaaaatgaaamatttcgataaataattac 540
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5211 gtaagttcttggagatagctgtttaaaaattcaaaatgaaacatttcgataaataattac 5270
Query: 541 cgagagatccaaattttaagttagtttgttagtcaaaatgtattcatcaattggaagtaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5271 cgagagatccaaattttaagttagtttgttagtcaaaatgtattcatcaattggaagtaa 5330
Query: 601 aaaartataataccaaaccaccattgagatgagttgtttcggcgttgcggttatattctt 660
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5331 aaaagt-taataccaaaccaccattgagatgagttgtttcggcgttgcggttatattctt 5389
Query: 661 cacaaataggtgctcctgaatttacctgctgattacgagtgctccaaaatgagaaatctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5390 cacaaataggtgctcctgaatttacctgctgattacgagtgctccaaaatgagaaatctg 5449
Query: 721 tctctgaattttcatgttcttcatcctcatatattctattcgatgcattatgaaagctaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5450 tctctgaattttcatgttcttcatcctcatatattctattcgatgcattatgaaagctaa 5509
Query: 781 tataggttttcatcatattctgtccctggttacattaaaatcaatattgtgtagattcat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5510 tataggttttcatcatattctgtccctggttacattaaaatcaatattgtgtagattcat 5569
Query: 841 tcatcttatca 851
|||||||||||
Sbjct: 5570 tcatcttatca 5580
>3x_Contig62
Length = 815
Score = 761 bits (382), Expect = 0.0
Identities = 399/406 (98%), Gaps = 1/406 (0%)
Strand = Plus / Plus
Query: 1 ctgtaagaagattcaccgttgtcttcaacagctctggtttcagagtcagtaactggttgg 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctgtaagcagattcaccgttgtcttcaacagctctggtttcagagtcagtaactggttgg 468
Query: 61 acaattgggaaagaggcagcagcagacaaagtttgttcagcttctggagccttacccttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 acaattgggaaagaggcagcagcagacaaagtttgttcagcttctggagccttacccttt 528
Query: 121 cttgggaagamgatgatcttagattggtattccttcaatctttggatgttcaagtccaag 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 cttgggaagacgatgatcttagattggtattccttcaatctttggatgttcaagtccaag 588
Query: 181 atttcttggtttctgttttgacgtctgtggtcgacagcaataccaatggttctggcgtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 atttcttggtttctgttttgacgtctgtggtcgacagcaataccaatggttctggcgtaa 648
Query: 241 g-aggagthaaaccagcagccttaatttcagccaaggtgaaacctctaccagctctaacc 299
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gcaggagtcaaaccagcagccttaatttcagccaaggtgaaacctctaccagctctaacc 708
Query: 300 tttctgttgtacttaacagttggagctctgacgamtggtctcaacaagtccaatggtctt 359
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 709 tttctgttgtacttaacagttggagctctgacgactggtctcaacaagtccaatggtctt 768
Query: 360 ggagcgatcttggcagccttagaagctctggcgtgamgtctggaga 405
|||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 769 ggagcgatcttggcagccttaggagctctggcgtgacgtctggaga 814
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6916
Number of Sequences: 1807
Number of extensions: 6916
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 2
length of query: 851
length of database: 10,358,551
effective HSP length: 16
effective length of query: 835
effective length of database: 10,329,639
effective search space: 8625248565
effective search space used: 8625248565
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)